Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs56112621 chr8:71588394 G/A XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs56115633 chr8:71597511 G/A XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs56139330 chr16:58197178 A/G CSNK2A2 chr16:58191811-58231824:- 0.63 5.13 4.29E-6 Box Plot
ACC rs56176828 chr7:72196650 G/A TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs56193091 chr7:72265923 C/T TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs56220414 chr7:64843206 CA/C INTS4L1 chr7:64601603-64694600:+ 0.67 5.09 5.04E-6 Box Plot
ACC rs56230211 chr7:64488594 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs56236555 chr7:72262888 C/A TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs56289895 chr7:72190246 T/G TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs56289931 chr8:71837754 A/G XKR9 chr8:71581600-71702606:+ 0.68 7.07 3.86E-9 Box Plot
ACC rs56294715 chr7:64455399 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs56301807 chr6:24628556 G/GT KIAA0319 chr6:24544332-24646383:- 0.48 5.11 4.67E-6 Box Plot
ACC rs56303509 chr7:64488252 A/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs56307235 chr12:31191729 G/A DDX11 chr12:31226779-31257725:+ 0.73 6.69 1.56E-8 Box Plot
ACC rs56322039 chr17:62979782 C/T AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot